1161. Structure-based discovery of opioid analgesics with reduced side effects.
作者: Aashish Manglik.;Henry Lin.;Dipendra K Aryal.;John D McCorvy.;Daniela Dengler.;Gregory Corder.;Anat Levit.;Ralf C Kling.;Viachaslau Bernat.;Harald Hübner.;Xi-Ping Huang.;Maria F Sassano.;Patrick M Giguère.;Stefan Löber.; Da Duan.;Grégory Scherrer.;Brian K Kobilka.;Peter Gmeiner.;Bryan L Roth.;Brian K Shoichet.
来源: Nature. 2016年537卷7619期185-190页
Morphine is an alkaloid from the opium poppy used to treat pain. The potentially lethal side effects of morphine and related opioids-which include fatal respiratory depression-are thought to be mediated by μ-opioid-receptor (μOR) signalling through the β-arrestin pathway or by actions at other receptors. Conversely, G-protein μOR signalling is thought to confer analgesia. Here we computationally dock over 3 million molecules against the μOR structure and identify new scaffolds unrelated to known opioids. Structure-based optimization yields PZM21-a potent Gi activator with exceptional selectivity for μOR and minimal β-arrestin-2 recruitment. Unlike morphine, PZM21 is more efficacious for the affective component of analgesia versus the reflexive component and is devoid of both respiratory depression and morphine-like reinforcing activity in mice at equi-analgesic doses. PZM21 thus serves as both a probe to disentangle μOR signalling and a therapeutic lead that is devoid of many of the side effects of current opioids.
1164. The long non-coding RNA Morrbid regulates Bim and short-lived myeloid cell lifespan.
作者: Jonathan J Kotzin.;Sean P Spencer.;Sam J McCright.;Dinesh B Uthaya Kumar.;Magalie A Collet.;Walter K Mowel.;Ellen N Elliott.;Asli Uyar.;Michelle A Makiya.;Margaret C Dunagin.;Christian C D Harman.;Anthony T Virtue.;Stella Zhu.;Will Bailis.;Judith Stein.;Cynthia Hughes.;Arjun Raj.;E John Wherry.;Loyal A Goff.;Amy D Klion.;John L Rinn.;Adam Williams.;Richard A Flavell.;Jorge Henao-Mejia.
来源: Nature. 2016年537卷7619期239-243页
Neutrophils, eosinophils and 'classical' monocytes collectively account for about 70% of human blood leukocytes and are among the shortest-lived cells in the body. Precise regulation of the lifespan of these myeloid cells is critical to maintain protective immune responses and minimize the deleterious consequences of prolonged inflammation. However, how the lifespan of these cells is strictly controlled remains largely unknown. Here we identify a long non-coding RNA that we termed Morrbid, which tightly controls the survival of neutrophils, eosinophils and classical monocytes in response to pro-survival cytokines in mice. To control the lifespan of these cells, Morrbid regulates the transcription of the neighbouring pro-apoptotic gene, Bcl2l11 (also known as Bim), by promoting the enrichment of the PRC2 complex at the Bcl2l11 promoter to maintain this gene in a poised state. Notably, Morrbid regulates this process in cis, enabling allele-specific control of Bcl2l11 transcription. Thus, in these highly inflammatory cells, changes in Morrbid levels provide a locus-specific regulatory mechanism that allows rapid control of apoptosis in response to extracellular pro-survival signals. As MORRBID is present in humans and dysregulated in individuals with hypereosinophilic syndrome, this long non-coding RNA may represent a potential therapeutic target for inflammatory disorders characterized by aberrant short-lived myeloid cell lifespan.
1165. SEDS proteins are a widespread family of bacterial cell wall polymerases.
作者: Alexander J Meeske.;Eammon P Riley.;William P Robins.;Tsuyoshi Uehara.;John J Mekalanos.;Daniel Kahne.;Suzanne Walker.;Andrew C Kruse.;Thomas G Bernhardt.;David Z Rudner.
来源: Nature. 2016年537卷7622期634-638页
Elongation of rod-shaped bacteria is mediated by a dynamic peptidoglycan-synthetizing machinery called the Rod complex. Here we report that, in Bacillus subtilis, this complex is functional in the absence of all known peptidoglycan polymerases. Cells lacking these enzymes survive by inducing an envelope stress response that increases the expression of RodA, a widely conserved core component of the Rod complex. RodA is a member of the SEDS (shape, elongation, division and sporulation) family of proteins, which have essential but ill-defined roles in cell wall biogenesis during growth, division and sporulation. Our genetic and biochemical analyses indicate that SEDS proteins constitute a family of peptidoglycan polymerases. Thus, B. subtilis and probably most bacteria use two distinct classes of polymerase to synthesize their exoskeleton. Our findings indicate that SEDS family proteins are core cell wall synthases of the cell elongation and division machinery, and represent attractive targets for antibiotic development.
1166. Diverse activation pathways in class A GPCRs converge near the G-protein-coupling region.
作者: A J Venkatakrishnan.;Xavier Deupi.;Guillaume Lebon.;Franziska M Heydenreich.;Tilman Flock.;Tamara Miljus.;Santhanam Balaji.;Michel Bouvier.;Dmitry B Veprintsev.;Christopher G Tate.;Gebhard F X Schertler.;M Madan Babu.
来源: Nature. 2016年536卷7617期484-7页
Class A G-protein-coupled receptors (GPCRs) are a large family of membrane proteins that mediate a wide variety of physiological functions, including vision, neurotransmission and immune responses. They are the targets of nearly one-third of all prescribed medicinal drugs such as beta blockers and antipsychotics. GPCR activation is facilitated by extracellular ligands and leads to the recruitment of intracellular G proteins. Structural rearrangements of residue contacts in the transmembrane domain serve as 'activation pathways' that connect the ligand-binding pocket to the G-protein-coupling region within the receptor. In order to investigate the similarities in activation pathways across class A GPCRs, we analysed 27 GPCRs from diverse subgroups for which structures of active, inactive or both states were available. Here we show that, despite the diversity in activation pathways between receptors, the pathways converge near the G-protein-coupling region. This convergence is mediated by a highly conserved structural rearrangement of residue contacts between transmembrane helices 3, 6 and 7 that releases G-protein-contacting residues. The convergence of activation pathways may explain how the activation steps initiated by diverse ligands enable GPCRs to bind a common repertoire of G proteins.
1167. Synergistic, ultrafast mass storage and removal in artificial mixed conductors.
Mixed conductors-single phases that conduct electronically and ionically-enable stoichiometric variations in a material and, therefore, mass storage and redistribution, for example, in battery electrodes. We have considered how such properties may be achieved synergistically in solid two-phase systems, forming artificial mixed conductors. Previously investigated composites suffered from poor kinetics and did not allow for a clear determination of such stoichiometric variations. Here we show, using electrochemical and chemical methods, that a melt-processed composite of the 'super-ionic' conductor RbAg4I5 and the electronic conductor graphite exhibits both a remarkable silver excess and a silver deficiency, similar to those found in single-phase mixed conductors, even though such behaviour is not possible in the individual phases. Furthermore, the kinetics of silver uptake and release is very fast. Evaluating the upper limit of the relaxation time [corrected] set by interfacial ambipolar diffusion reveals chemical diffusion coefficients that are even higher than those achieved for sodium chloride in bulk liquid water. These results could potentially stimulate systematic research into powerful, even mesoscopic, artificial mixed conductors.
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