1121. A developmental coordinate of pluripotency among mice, monkeys and humans.
作者: Tomonori Nakamura.;Ikuhiro Okamoto.;Kotaro Sasaki.;Yukihiro Yabuta.;Chizuru Iwatani.;Hideaki Tsuchiya.;Yasunari Seita.;Shinichiro Nakamura.;Takuya Yamamoto.;Mitinori Saitou.
来源: Nature. 2016年537卷7618期57-62页
The epiblast (EPI) is the origin of all somatic and germ cells in mammals, and of pluripotent stem cells in vitro. To explore the ontogeny of human and primate pluripotency, here we perform comprehensive single-cell RNA sequencing for pre- and post-implantation EPI development in cynomolgus monkeys (Macaca fascicularis). We show that after specification in the blastocysts, EPI from cynomolgus monkeys (cyEPI) undergoes major transcriptome changes on implantation. Thereafter, while generating gastrulating cells, cyEPI stably maintains its transcriptome over a week, retains a unique set of pluripotency genes and acquires properties for 'neuron differentiation'. Human and monkey pluripotent stem cells show the highest similarity to post-implantation late cyEPI, which, despite co-existing with gastrulating cells, bears characteristics of pre-gastrulating mouse EPI and epiblast-like cells in vitro. These findings not only reveal the divergence and coherence of EPI development, but also identify a developmental coordinate of the spectrum of pluripotency among key species, providing a basis for better regulation of human pluripotency in vitro.
1122. Serotonin engages an anxiety and fear-promoting circuit in the extended amygdala.
作者: Catherine A Marcinkiewcz.;Christopher M Mazzone.;Giuseppe D'Agostino.;Lindsay R Halladay.;J Andrew Hardaway.;Jeffrey F DiBerto.;Montserrat Navarro.;Nathan Burnham.;Claudia Cristiano.;Cayce E Dorrier.;Gregory J Tipton.;Charu Ramakrishnan.;Tamas Kozicz.;Karl Deisseroth.;Todd E Thiele.;Zoe A McElligott.;Andrew Holmes.;Lora K Heisler.;Thomas L Kash.
来源: Nature. 2016年537卷7618期97-101页
Serotonin (also known as 5-hydroxytryptamine (5-HT)) is a neurotransmitter that has an essential role in the regulation of emotion. However, the precise circuits have not yet been defined through which aversive states are orchestrated by 5-HT. Here we show that 5-HT from the dorsal raphe nucleus (5-HTDRN) enhances fear and anxiety and activates a subpopulation of corticotropin-releasing factor (CRF) neurons in the bed nucleus of the stria terminalis (CRFBNST) in mice. Specifically, 5-HTDRN projections to the BNST, via actions at 5-HT2C receptors (5-HT2CRs), engage a CRFBNST inhibitory microcircuit that silences anxiolytic BNST outputs to the ventral tegmental area and lateral hypothalamus. Furthermore, we demonstrate that this CRFBNST inhibitory circuit underlies aversive behaviour following acute exposure to selective serotonin reuptake inhibitors (SSRIs). This early aversive effect is mediated via the corticotrophin-releasing factor type 1 receptor (CRF1R, also known as CRHR1), given that CRF1R antagonism is sufficient to prevent acute SSRI-induced enhancements in aversive learning. These results reveal an essential 5-HTDRN→CRFBNST circuit governing fear and anxiety, and provide a potential mechanistic explanation for the clinical observation of early adverse events to SSRI treatment in some patients with anxiety disorders.
1124. Switching on electrocatalytic activity in solid oxide cells.
Solid oxide cells (SOCs) can operate with high efficiency in two ways-as fuel cells, oxidizing a fuel to produce electricity, and as electrolysis cells, electrolysing water to produce hydrogen and oxygen gases. Ideally, SOCs should perform well, be durable and be inexpensive, but there are often competitive tensions, meaning that, for example, performance is achieved at the expense of durability. SOCs consist of porous electrodes-the fuel and air electrodes-separated by a dense electrolyte. In terms of the electrodes, the greatest challenge is to deliver high, long-lasting electrocatalytic activity while ensuring cost- and time-efficient manufacture. This has typically been achieved through lengthy and intricate ex situ procedures. These often require dedicated precursors and equipment; moreover, although the degradation of such electrodes associated with their reversible operation can be mitigated, they are susceptible to many other forms of degradation. An alternative is to grow appropriate electrode nanoarchitectures under operationally relevant conditions, for example, via redox exsolution. Here we describe the growth of a finely dispersed array of anchored metal nanoparticles on an oxide electrode through electrochemical poling of a SOC at 2 volts for a few seconds. These electrode structures perform well as both fuel cells and electrolysis cells (for example, at 900 °C they deliver 2 watts per square centimetre of power in humidified hydrogen gas, and a current of 2.75 amps per square centimetre at 1.3 volts in 50% water/nitrogen gas). The nanostructures and corresponding electrochemical activity do not degrade in 150 hours of testing. These results not only prove that in operando methods can yield emergent nanomaterials, which in turn deliver exceptional performance, but also offer proof of concept that electrolysis and fuel cells can be unified in a single, high-performance, versatile and easily manufactured device. This opens up the possibility of simple, almost instantaneous production of highly active nanostructures for reinvigorating SOCs during operation.
1126. Metallaphotoredox-catalysed sp(3)-sp(3) cross-coupling of carboxylic acids with alkyl halides.
作者: Craig P Johnston.;Russell T Smith.;Simon Allmendinger.;David W C MacMillan.
来源: Nature. 2016年536卷7616期322-5页
In the past 50 years, cross-coupling reactions mediated by transition metals have changed the way in which complex organic molecules are synthesized. The predictable and chemoselective nature of these transformations has led to their widespread adoption across many areas of chemical research. However, the construction of a bond between two sp(3)-hybridized carbon atoms, a fundamental unit of organic chemistry, remains an important yet elusive objective for engineering cross-coupling reactions. In comparison to related procedures with sp(2)-hybridized species, the development of methods for sp(3)-sp(3) bond formation via transition metal catalysis has been hampered historically by deleterious side-reactions, such as β-hydride elimination with palladium catalysis or the reluctance of alkyl halides to undergo oxidative addition. To address this issue, nickel-catalysed cross-coupling processes can be used to form sp(3)-sp(3) bonds that utilize organometallic nucleophiles and alkyl electrophiles. In particular, the coupling of alkyl halides with pre-generated organozinc, Grignard and organoborane species has been used to furnish diverse molecular structures. However, the manipulations required to produce these activated structures is inefficient, leading to poor step- and atom-economies. Moreover, the operational difficulties associated with making and using these reactive coupling partners, and preserving them through a synthetic sequence, has hindered their widespread adoption. A generically useful sp(3)-sp(3) coupling technology that uses bench-stable, native organic functional groups, without the need for pre-functionalization or substrate derivatization, would therefore be valuable. Here we demonstrate that the synergistic merger of photoredox and nickel catalysis enables the direct formation of sp(3)-sp(3) bonds using only simple carboxylic acids and alkyl halides as the nucleophilic and electrophilic coupling partners, respectively. This metallaphotoredox protocol is suitable for many primary and secondary carboxylic acids. The merit of this coupling strategy is illustrated by the synthesis of the pharmaceutical tirofiban in four steps from commercially available starting materials.
1127. The active site of low-temperature methane hydroxylation in iron-containing zeolites.
作者: Benjamin E R Snyder.;Pieter Vanelderen.;Max L Bols.;Simon D Hallaert.;Lars H Böttger.;Liviu Ungur.;Kristine Pierloot.;Robert A Schoonheydt.;Bert F Sels.;Edward I Solomon.
来源: Nature. 2016年536卷7616期317-21页
An efficient catalytic process for converting methane into methanol could have far-reaching economic implications. Iron-containing zeolites (microporous aluminosilicate minerals) are noteworthy in this regard, having an outstanding ability to hydroxylate methane rapidly at room temperature to form methanol. Reactivity occurs at an extra-lattice active site called α-Fe(ii), which is activated by nitrous oxide to form the reactive intermediate α-O; however, despite nearly three decades of research, the nature of the active site and the factors determining its exceptional reactivity are unclear. The main difficulty is that the reactive species-α-Fe(ii) and α-O-are challenging to probe spectroscopically: data from bulk techniques such as X-ray absorption spectroscopy and magnetic susceptibility are complicated by contributions from inactive 'spectator' iron. Here we show that a site-selective spectroscopic method regularly used in bioinorganic chemistry can overcome this problem. Magnetic circular dichroism reveals α-Fe(ii) to be a mononuclear, high-spin, square planar Fe(ii) site, while the reactive intermediate, α-O, is a mononuclear, high-spin Fe(iv)=O species, whose exceptional reactivity derives from a constrained coordination geometry enforced by the zeolite lattice. These findings illustrate the value of our approach to exploring active sites in heterogeneous systems. The results also suggest that using matrix constraints to activate metal sites for function-producing what is known in the context of metalloenzymes as an 'entatic' state-might be a useful way to tune the activity of heterogeneous catalysts.
1128. Dependence of the critical temperature in overdoped copper oxides on superfluid density.
The physics of underdoped copper oxide superconductors, including the pseudogap, spin and charge ordering and their relation to superconductivity, is intensely debated. The overdoped copper oxides are perceived as simpler, with strongly correlated fermion physics evolving smoothly into the conventional Bardeen-Cooper-Schrieffer behaviour. Pioneering studies on a few overdoped samples indicated that the superfluid density was much lower than expected, but this was attributed to pair-breaking, disorder and phase separation. Here we report the way in which the magnetic penetration depth and the phase stiffness depend on temperature and doping by investigating the entire overdoped side of the La2-xSrxCuO4 phase diagram. We measured the absolute values of the magnetic penetration depth and the phase stiffness to an accuracy of one per cent in thousands of samples; the large statistics reveal clear trends and intrinsic properties. The films are homogeneous; variations in the critical superconducting temperature within a film are very small (less than one kelvin). At every level of doping the phase stiffness decreases linearly with temperature. The dependence of the zero-temperature phase stiffness on the critical superconducting temperature is generally linear, but with an offset; however, close to the origin this dependence becomes parabolic. This scaling law is incompatible with the standard Bardeen-Cooper-Schrieffer description.
1129. Analysis of protein-coding genetic variation in 60,706 humans.
作者: Monkol Lek.;Konrad J Karczewski.;Eric V Minikel.;Kaitlin E Samocha.;Eric Banks.;Timothy Fennell.;Anne H O'Donnell-Luria.;James S Ware.;Andrew J Hill.;Beryl B Cummings.;Taru Tukiainen.;Daniel P Birnbaum.;Jack A Kosmicki.;Laramie E Duncan.;Karol Estrada.;Fengmei Zhao.;James Zou.;Emma Pierce-Hoffman.;Joanne Berghout.;David N Cooper.;Nicole Deflaux.;Mark DePristo.;Ron Do.;Jason Flannick.;Menachem Fromer.;Laura Gauthier.;Jackie Goldstein.;Namrata Gupta.;Daniel Howrigan.;Adam Kiezun.;Mitja I Kurki.;Ami Levy Moonshine.;Pradeep Natarajan.;Lorena Orozco.;Gina M Peloso.;Ryan Poplin.;Manuel A Rivas.;Valentin Ruano-Rubio.;Samuel A Rose.;Douglas M Ruderfer.;Khalid Shakir.;Peter D Stenson.;Christine Stevens.;Brett P Thomas.;Grace Tiao.;Maria T Tusie-Luna.;Ben Weisburd.;Hong-Hee Won.;Dongmei Yu.;David M Altshuler.;Diego Ardissino.;Michael Boehnke.;John Danesh.;Stacey Donnelly.;Roberto Elosua.;Jose C Florez.;Stacey B Gabriel.;Gad Getz.;Stephen J Glatt.;Christina M Hultman.;Sekar Kathiresan.;Markku Laakso.;Steven McCarroll.;Mark I McCarthy.;Dermot McGovern.;Ruth McPherson.;Benjamin M Neale.;Aarno Palotie.;Shaun M Purcell.;Danish Saleheen.;Jeremiah M Scharf.;Pamela Sklar.;Patrick F Sullivan.;Jaakko Tuomilehto.;Ming T Tsuang.;Hugh C Watkins.;James G Wilson.;Mark J Daly.;Daniel G MacArthur.; .
来源: Nature. 2016年536卷7616期285-91页
Large-scale reference data sets of human genetic variation are critical for the medical and functional interpretation of DNA sequence changes. Here we describe the aggregation and analysis of high-quality exome (protein-coding region) DNA sequence data for 60,706 individuals of diverse ancestries generated as part of the Exome Aggregation Consortium (ExAC). This catalogue of human genetic diversity contains an average of one variant every eight bases of the exome, and provides direct evidence for the presence of widespread mutational recurrence. We have used this catalogue to calculate objective metrics of pathogenicity for sequence variants, and to identify genes subject to strong selection against various classes of mutation; identifying 3,230 genes with near-complete depletion of predicted protein-truncating variants, with 72% of these genes having no currently established human disease phenotype. Finally, we demonstrate that these data can be used for the efficient filtering of candidate disease-causing variants, and for the discovery of human 'knockout' variants in protein-coding genes.
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